bento.ut.get_points_metadata

bento.ut.get_points_metadata(sdata, metadata_keys, points_key, astype='pandas')

Get points metadata.

Parameters:

• sdata (SpatialData) – Spatial formatted SpatialData object

• metadata_keys (str or list of str) – Key(s) for sdata.points[points_key][key] to use

• points_key (str, optional) – Key for sdata.points to use, by default “transcripts”

• astype (str, optional) – Whether to return a ‘pandas’ Series or ‘dask’ DataFrame, by default “pandas”

Returns:

Returns sdata.points[points_key][metadata_keys] as a pd.DataFrame or dd.DataFrame

Return type:

pd.DataFrame or dd.DataFrame