bento.tl.fe_xia2019

bento.tl.fe_xia2019(sdata, **kwargs)

Compute enrichment scores from subcellular compartment gene sets from Xia et al. 2019 (MERFISH 10k U2-OS). See bento.tl.fe docs for parameters details.

Parameters:

data (SpatialData) – Spatial formatted SpatialData object.

Returns:

Enrichment scores for each gene set.

Return type:

DataFrame