bento.tl.fe_xia2019¶
- bento.tl.fe_xia2019(sdata, **kwargs)¶
Compute enrichment scores from subcellular compartment gene sets from Xia et al. 2019 (MERFISH 10k U2-OS). See bento.tl.fe docs for parameters details.
- Parameters:
data (SpatialData) – Spatial formatted SpatialData object.
- Returns:
Enrichment scores for each gene set.
- Return type:
DataFrame