bento.tl.lp_stats

bento.tl.lp_stats(sdata)

Computes frequencies of localization patterns across cells and genes.

Parameters:

• sdata (SpatialData) – Spatial formatted SpatialData object.

• instance_key (str) – cell boundaries instance key

Returns:

sdata – .tables[“table”].uns[‘lp_stats’]: DataFrame of localization pattern frequencies.

Return type:

SpatialData